PEER REVIEWED PUBLICATIONS
- I.S. Gabashvili "The Incidence and Effect of COVID-19 Vaccine Adverse Events on Breakthrough Infections: Decentralized Observational Study With Underrepresented Groups" JMIR Form Res. 2022;6(11):e41914 doi: 10.2196/41914
- I.S. Gabashvili "Cutaneous Bacteria in the Gut Microbiome as Biomarkers of Systemic Malodor and People Are Allergic to Me (PATM) Conditions: Insights From a Virtually Conducted Clinical Trial" JMIR Dermatol 2020;3(1):e10508 DOI: 10.2196/10508
- I.S. Gabashvili, B.H. Sokolowski, C.C.Morton, A.B.Giersch "Ion Channel Gene Expression in the Inner Ear", J Assoc Res Otolaryngol. 2007 Sep;8(3):305-28.
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Supplementary Material
Sequences: KCNMA1(1) KCNMA1(2) Clic4 KCNA2 TRPM3 - M. Peleg, I.S. Gabashvili, R.B. Altman, "Qualitative knowledge models in Functional Genomics and Proteomics", in: Genomics and Proteomics Engineering in Medicine and Biology (Akay,M., ed), Wiley-IEEE Press, 2007.
view/download (PDF 1.2M) - I.S. Gabashvili, R. Carter, P. Markstein, A.B. Giersch "Differential Gene Expression in the Auditory System", Lecture Notes in Computer Science, Vol. 3594, 2005, 1-8.
view/download (PDF 1.5M) - I.S. Gabashvili, M. Whirl-Carrillo, M. Bada, D.R. Banatao and R.B. Altman, "Ribosomal Dynamics Inferred from Variations in Experimental Measurements", RNA, Vol. 9, 2003, 1301-1307.
view/download (PDF 0.4M) - Peleg M., I.S. Gabashvili and R.B. Altman, "Qualitative models of molecular function: linking genetic polymorphisms of tRNA to their functional sequelae", Proc. of the IEEE, Vol. 90, No. 12, pp. 1875-1886, 2002.
view/download (PDF 1.35M) - M. Whirl-Carrillo, I.S. Gabashvili, D.R. Banatao, M. Bada and R.B. Altman, "Mining biochemical information: lessons taught by the ribosome", RNA, Vol. 8, No. 3, pp. 279-289, 2002.
view/download (PDF 0.4M) - I.S. Gabashvili, S.T. Gregory, M. Valle, R. Grassucci, M. Worbs, M.C. Wahl, A.E. Dahlberg, J. Frank, "The polypeptide tunnel system in the ribosome and its gating in erythromycin resistance mutants of L4 and L22", Molecular Cell, Vol. 8, No. 1, pp.181-188, 2001.
view/download (PDF 0.3M) - I.S. Gabashvili, R.K. Agrawal, C.M.T. Spahn, R. Grassucci, D.I. Svergun, J. Frank, P.A. Penczek, "Solution structure of the E.coli 70S ribosome at 11.5A resolution", Cell, Vol. 100, No. 5, pp. 537-549, 2000.
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PDB coordinates - I.S. Gabashvili, M. Joshi, and M. Fragata, "Structure of polypeptides and biopolymers probed with FTIR spectroscopy. The tyrosine ring stretching modes in poly (L-tyrosine) and photosystem II", Recent Research Developments in Physical Chemistry, Vol. 4, pp. 83-99, 2000.
- M.S. Van Loock, R.K. Agrawal, I.S. Gabashvili, L. Qi, J. Frank, and S.C. Harvey, "Movement of the Decoding Region of the 16S RNA Accompanies tRNA Translocation", Journal of Molecular Biology, Vol. 304, No. 4, pp. 507-515, 2000. view/download (PDF)
- J.A. Ségui, V. Maire, I.S. Gabashvili and M. Fragata, "Oxygen evolution loss and structural transitions in photosystem II induced by low intensity UV-B radiation of 280 nm. wavelength", J. Photochem. Photobiol., B: Biol., Vol. 56, No. 1, pp. 39-47, 2000.
view/download (PDF 0.3M) - I.S. Gabashvili, R.K. Agrawal, R. Grassucci, C.S. Squires, A.E. Dahlberg, J. Frank, "Major rearrangements in the 70S ribosomal 3D structure caused by a conformational switch in 16S ribosomal RNA", EMBO journal, Vol. 18, No. 22, pp. 6501-6507, 1999. view/download (PDF 1.35M)
- I.S. Gabashvili, R.K. Agrawal, R. Grassucci, J. Frank, "Structure and Structural Variations of the Escherichia coli 30S Ribosomal Subunit as Revealed by Three-Dimensional Cryo-electron Microscopy", Journal of Molecular Biology, Vol. 286, No. 5, pp. 1285-1291, 1999. (Fig.1 from the article used for the cover page illustration) view/download (PDF 1.35M)
- A. Khodjakov, I.S. Gabashvili, C.L. Rieder, "Dumb" versus "Smart" Kinetochore Model for Chromosome Congression During Mitosis in Verterbrate Somatic Cells", Cell Motility & the Cytoskeleton, Vol. 43, No. 3, pp. 179-185, 1999. (cover page illustration)
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- A. Malhotra, P.A. Penczek, R.K. Agrawal, I.S. Gabashvili, R.A. Grassucci, R. Junemann, N. Burkhardt, K.H. Nierhaus and J. Frank, "E.coli 70S Ribosome at 15A Resolution and Localization of Fmet-tRNA(fmet) at the P-site by Cryo-electron Microscopy", Journal of Molecular Biology, Vol. 280, pp. 103-115, 1998. (Fig.6A from the article used for the cover page illustration)
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- I.S. Gabashvili, A. Menikh, J. Segui, M. Fragata, "Protein structure of photosystem II studied by FT-IR spectroscopy. Effect of digalactosyldiacylglycerol on the tyrosine side chain residues", Journal of Molecular Structure, Vol. 444, pp. 123-133, 1998.
- I.S. Gabashvili, S.A. Khan, S.J. Hayes, P. Serwer, "Polymorphism of T7 bacteriophage", Journal of Molecular Biology, Vol. 273, No. 3, pp. 658-667, 1997.
view/download (PDF 0.3M) - M. Fragata, E.K. Nenonéné, V. Maire, I.S. Gabashvili, "Structure of the Phosphatidylglycerol-photosystem II complex studied by FT-IR Spectroscopy. Mg(II) effect on the polar head group of phosphatidylglycerol", Journal of Molecular Structure, Vol. 405, Nos. 2-3, pp. 151-158, 1997. view/download (PDF)
- I. Gabashvili, Z. Brelidze, Yu. Stepanov, G. Khachapuridze, "Simulation of the Mechanisms of Cell Genome Stability and Instability", In: "Mathematical Modelling: Methodology, Software Tools and Applications", pp. 79-83 (Popova E.D., ed) DATECS Publish., Sofia, Bulgaria, 1993.
- I.S. Gabashvili, A.Yu. Grosberg, "Dynamics of Double-Stranded DNA Reptation from Bacteriophage", Journal of Biomolecular Structure and Dynamics. , Vol. 9, No. 5, pp. 911-920, 1992.
view/download (PDF 3.9M) - I.S. Gabashvili, A.Yu. Grosberg, "DNA Reptation from Bacteriophage", Biophysics, Vol. 36, pp. 788-793 , 1991.
(Biofizika,1991,36,788-793:Rus) - I.S. Gabashvili, A.Yu. Grosberg, D.V. Kuznetsov, G.M. Mrevlishvili, "Theoretical Model of DNA Packaging in the Phage Head", Biophysics , Vol. 36, No. 5, pp. 782-789, 1991. (Biofizika,1991,36,780-787:Rus)